Sequencing for MinkeWhale-00 Genome by Illumina HiSeq2000 with Insert... - SRA

SRX311830: Sequencing for MinkeWhale-00 Genome by Illumina HiSeq2000 with Insert Size 5kb
1 ILLUMINA (Illumina HiSeq 2000) run: 241.6M spots, 23.7G bases, 15.2Gb downloads

Design: Whole genomic DNA extracted from the minke whale sample was sequenced using an Illumina HiSeq2000 for minke whale genome de novo assembly. The mate pair library of ~5kb DNA fragments was constructed and sequenced.

Submitted by: Korea Institute of Ocean Science and Technology

Study: Cetacea Genome sequencing and assembly

PRJNA72723 • SRP025154 • All experiments • All runs

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To provide a full genome sequence of the most abundant whale species in the world. It will provide a genetic diversity of the species and will help us understand how whales adapt to environmental stresses. Also, as whales are long-living, the genome comparisons may provide clues to their longevity. Finally, this study will help us figure out the evolution and phylogeny of whale.

Sample: General Sample for Balaenoptera acutorostrata of which PGI sample id is MinkeWhale-00

SAMN02192642 • SRS439234 • All experiments • All runs

Organism: Balaenoptera acutorostrata scammoni

Library:

Name: Genome_of_Insert_Size_5kb

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward50 reverse

Runs: 1 run, 241.6M spots, 23.7G bases, 15.2Gb

Run	# of Spots	# of Bases	Size	Published
SRR914419	241,569,167	23.7G	15.2Gb	2015-07-22

ID:: 435443

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